Yeast Segmentation Web Tool

Got microscopy images of yeast cells that you need to segment? Upload your image(s) and get downloadable segmentation results within minutes.
Upload up to 10 images (maximum image size: 4 MB each)

Questions? Check out our FAQ.

For more detailed benchmarks, check out our Bioinformatics paper.
If you find this tool useful, we'd highly appreciate any citations!

For examples of how to upload output of this webtool into Python, Matlab, ImageJ, or R for analysis, check out our example postprocessing scripts.

We accept batch uploads of up to 10 images
If you still need to run more images than this, or images larger than our maximum size of 4 MB per image, try downloading our user-friendly Python code from our GitHub to run on your own local machine.